Translation Elongation and Elongation Factors

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translation elongation-factors ribosome protein-synthesis

Core Idea

During elongation, EF-Tu (prokaryotes) or eEF1A (eukaryotes) delivers aminoacyl-tRNA to the ribosomal A site in a GTP-dependent manner. GTP hydrolysis occurs upon correct codon-anticodon pairing (proofreading step). EF-G (prokaryotes) or eEF2 (eukaryotes) then catalyzes translocation of tRNAs and mRNA, advancing the ribosome by one codon.

How It's Best Learned

Use cryo-EM structures or animations to visualize the three-site model of the ribosome (A, P, E). Trace the movement of tRNAs and mRNA through successive cycles. Understand how GTP hydrolysis provides energy and ensures fidelity.

Common Misconceptions

Explainer

From your study of translation initiation, you know that the ribosome assembles on the mRNA with the initiator tRNA positioned in the P site (peptidyl site), base-paired with the start codon. The A site (aminoacyl site) is empty and ready to accept the next aminoacyl-tRNA. Elongation is the repetitive cycle that builds the polypeptide chain one amino acid at a time, and it proceeds through three distinct steps: codon-directed binding, peptide bond formation, and translocation.

In the first step, an aminoacyl-tRNA does not simply float into the A site on its own. Instead, the elongation factor EF-Tu (in prokaryotes) or eEF1A (in eukaryotes) delivers it in a complex with GTP. Think of EF-Tu as an escort with a security clearance — it brings the charged tRNA to the ribosome and holds it in position while the ribosome checks whether the anticodon matches the codon in the A site. If the match is correct, the geometry of the codon-anticodon interaction triggers a conformational change in the ribosome that stimulates GTP hydrolysis on EF-Tu. This is the proofreading step: the energy of GTP hydrolysis is used not to form the peptide bond itself, but to introduce a kinetic delay that gives incorrectly matched tRNAs time to dissociate before the irreversible step. Only after GTP hydrolysis and EF-Tu release is the aminoacyl-tRNA fully accommodated into the A site.

Once the correct aminoacyl-tRNA is in the A site, peptidyl transferase — an activity of the ribosomal RNA itself (making the ribosome a ribozyme) — catalyzes formation of a peptide bond between the amino acid on the A-site tRNA and the growing polypeptide chain attached to the P-site tRNA. The polypeptide is transferred from the P-site tRNA to the A-site tRNA, leaving a deacylated (empty) tRNA in the P site. At this point, the ribosome is in a hybrid state — the tRNAs have shifted relative to the large subunit but not yet relative to the small subunit.

The final step of each cycle is translocation, driven by the elongation factor EF-G (prokaryotes) or eEF2 (eukaryotes). EF-G binds the ribosome with GTP and, upon hydrolysis, physically moves the ribosome one codon down the mRNA. The deacylated tRNA shifts from the P site to the E site (exit site) and is released, the peptidyl-tRNA moves from A to P, and a new codon is exposed in the empty A site. The entire cycle then repeats — at a remarkable rate of about 15–20 amino acids per second in bacteria. Each elongation factor participates transiently: EF-Tu and EF-G bind, do their work, and dissociate within each cycle. EF-Tu is recharged by the exchange factor EF-Ts, which swaps GDP for GTP, readying EF-Tu for another round of tRNA delivery.

Practice Questions 5 questions

Prerequisite Chain

Counting to 10Counting to 20Understanding ZeroThe Number ZeroCounting to FiveOne-to-One CorrespondenceCombining Small Groups Within 5Addition Within 10Addition Within 20Two-Digit Addition Without RegroupingTwo-Digit Addition with RegroupingAddition Within 100Repeated Addition as MultiplicationMultiplication Facts Within 100Division as Equal SharingDivision as Grouping (Measurement Division)Division: Grouping (Repeated Subtraction) ModelDivision: Fair Sharing ModelDivision as Equal SharingDivision as GroupingBasic Division FactsDivision Facts Within 100Two-Digit by One-Digit DivisionDivision with RemaindersRemainders and Quotients in DivisionDivision Word ProblemsIntroduction to Long DivisionFactors and MultiplesPrime and Composite NumbersEquivalent FractionsRelating Fractions and DecimalsDecimal Place ValueReading and Writing DecimalsComparing and Ordering DecimalsAdding and Subtracting DecimalsMultiplying DecimalsDividing DecimalsDividing FractionsMixed Number ArithmeticOrder of OperationsInteger Order of OperationsVariable ExpressionsCombining Like TermsOne-Step EquationsTwo-Step EquationsSolving Multi-Step EquationsEquations with Variables on Both SidesAngle Pairs: Complementary, Supplementary, and VerticalParallel Lines and TransversalsCorresponding AnglesAlternate Interior AnglesTriangle Angle Sum TheoremExterior Angle TheoremTriangle Inequality TheoremSimilar Triangles: AA SimilaritySimilar Triangles: SSS and SAS SimilarityProportions in Similar TrianglesRight Triangle Trigonometry IntroductionTrigonometric Ratios ReviewRadian MeasureConverting Between Degrees and RadiansThe Unit CircleGraphing Sine and CosineGraphing Tangent and Reciprocal Trigonometric FunctionsDerivatives of Trigonometric FunctionsAntiderivativesIterated Integrals and Fubini's TheoremDouble Integrals in Cartesian CoordinatesDouble Integrals over Rectangular RegionsDouble Integrals in Polar CoordinatesDouble Integrals: Definition and SetupIterated Integrals and Fubini's TheoremDouble Integrals over Rectangular RegionsDouble Integrals over General RegionsApplications of Double Integrals: Area, Mass, and MomentsTriple Integrals in Cartesian CoordinatesTriple Integrals in Cylindrical and Spherical CoordinatesChange of Variables and the Jacobian DeterminantApplications of Triple Integrals: Volume and MassVector Fields and Their RepresentationsLine Integrals of Vector FieldsGreen's TheoremSurface Integrals and Flux of Vector FieldsSurface Integrals and Flux of Vector FieldsDivergence Theorem: Flux and OutflowDivergence TheoremElectric FluxGauss's LawConductors in Electrostatic EquilibriumCapacitance and CapacitorsDielectricsDielectric Constant and Relative PermittivityElectric Field Inside Dielectric MaterialsDielectric Materials and PolarizationDielectric Susceptibility and PermittivityEnergy Density in Electric FieldsElectric Current and Current DensityElectrical Resistance and ResistivityOhm's Law and Circuit ElementsElectromotive Force (EMF) and BatteriesKirchhoff's Circuit Laws: Voltage and CurrentDC Circuit Network Analysis MethodsTransient Response in RC CircuitsRC CircuitsLC and RLC CircuitsAC Circuits: FundamentalsImpedance and ReactanceAC Power and ResonanceElectromagnetic WavesThe Electromagnetic SpectrumBlackbody Radiation and Planck's LawPhotoelectric EffectThe Photon: Light as QuantaCompton ScatteringWave-Particle Dualityde Broglie WavelengthHeisenberg Uncertainty PrincipleWavefunction and the Born RuleThe Schrödinger EquationState Vectors and WavefunctionsQuantum SuperpositionQuantum EntanglementBell Theorem and Bell InequalitiesPostulates of Quantum MechanicsScattering TheoryIntroduction to Scattering TheoryPartial Wave Analysis in ScatteringSpin Angular MomentumElectron Spin and Intrinsic Magnetic MomentStern-Gerlach Experiment: Spin Quantization and MeasurementElectron Diffraction and Matter Wave PropertiesDavisson-Germer Experiment: Crystal Diffraction of ElectronsElectron Diffraction and Matter Wave InterferenceWavefunctions and Probability Density InterpretationQuantum Superposition and Linear Combinations of StatesQuantum Operators and ObservablesCanonical Commutation Relations and UncertaintyHeisenberg Uncertainty Principle and Measurement LimitsTime-Independent Schrödinger Equation and EigenvaluesHydrogen Atom in Quantum MechanicsSpectral Lines and Energy TransitionsSelection Rules for Atomic TransitionsLS and jj Coupling Schemes in Multi-Electron AtomsPauli Exclusion Principle and Antisymmetric WavefunctionsElectron Configuration and the Aufbau PrincipleThe Periodic Table and Atomic Electronic StructureThe Periodic TableElectron ConfigurationPeriodic TrendsIonization EnergyIonic BondingLewis StructuresResonance Structures and Delocalized ElectronsResonance and Formal ChargeMolecular Polarity and Dipole MomentsIntermolecular ForcesStates of Matter and Phase Changes: Melting, Boiling, and SublimationGas Laws and the Ideal Gas EquationGas Stoichiometry and Volume-Volume CalculationsThermochemistry and EnthalpyHeat Capacity and CalorimetryEntropy and Molecular DisorderSpontaneity and ΔGEntropy and Gibbs Free EnergyChemical EquilibriumAcid-Base ChemistryOrganic Reaction Mechanisms and Arrow PushingElectrophilic Addition to AlkenesAromaticity and BenzeneDNA StructureCentral Dogma of Molecular BiologyTranscription: DNA to RNARNA Types and StructureRNA Processing and SplicingTranslation: RNA to ProteinTranslation: Initiation and ElongationTranslation Initiation: Start Codons and Ribosomal ScanningmRNA Translation Start Sites and InitiationRibosomal Initiation Factors and Initiator tRNATranslation Elongation and Elongation Factors

Longest path: 180 steps · 785 total prerequisite topics

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